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Winter in Jokkmokk, northern Sweden

MEMBERS

We are building up our team! If you are interested in Computational biology or Bioinformatics research, welcome to contact us at shirley_siu_[at]_umac_[dot]_mo (please remove all underscores) to discuss about your research direction and involvement.


Lab Supervisor
shirleysiu
Shirley W. I. Siu

Assistant Professor, Department of Computer and Information Science
Faculty of Science and Technology, University of Macau
Ph.D. Saarland University 2010

Email:
Personal Homepage, Official homepage (faculty)

Short Bio:
Dr. Siu completed her master degree at the Max Planck Research School for Computer Science in 2005. Afterwards, she joined the Theoretical and Computational Membrane Biology group at Saarland University where she received her Ph.D. degree (Dr. rer. nat.) in 2010. Then, she joined the Computational Biology group at University of Erlangen for postdoctoral training. Currently, she is an Assistant Professor in the Department of Computer and Information Science at University of Macau. Her research interests include molecular dynamics simulations, protein structure prediction, machine learning and its application in drug discovery and bioinformatics.

Postdoctoral Fellow

Pratiti Bhadra            

Ph.D. Mathematical Sciences, Indian Institute of Science
B.Tech. Information Technology, West Bengal University of Technology

Email: pratitibhadra_[at]_umac_[dot]_mo (please remove all underscores)
Personal homepage

Research topic: Coarse-grainded modeling of self-assembled monolayers and studies of protein adsorption

PhD Student
Jimmy C. F. Ngai            
M.Sc. Software Engineering, University of Macau
B.Sc. Software Engineering, University of Macau

Email: yb57453_[at]_umac_[dot]_mo (please remove all underscores)

Research topic: Evolutionary algorithms and applications on structrual bioinformatics
Faraz Mohammadali Shaikh          
M.Sc. Bioinformatics, Sri Ramachandra University
B.Sc. Bioinformatics, University of Saurashtra

Email: yb57405_[at]_umac_[dot]_mo (please remove all underscores)

Research topic: Flexible receptor protein-ligand docking algorithms

(On research visit to University of Oxford)
Master Student
yan Jie Lu YAN
B.Sc. Information Countermeasure Technology, Faculty of Electro-Optical Engineering, Changchun University of Science and Technology
Email: mb55463_[at]_connect_[dot]_umac_[dot]_mo (please remove all underscores)

Research topic: Multi-label prediction of antimicrobial peptides by machine learning techniques
allan Allan, Hang LIN            
B.Sc. Statistics, Sun Yat-Sen University, China
Email: lhang33_[at]_126_[dot]_com (please remove all underscores)

Research topic: Optimization algorithms for Bioinformatics applications
giotto
Giotto Hio Kuan TAI            

B.Sc. Computer Science, University of Macau
Email: mb55502_[at]_umac_[dot]_mo (please remove all underscores)

Research topic: Structure prediction of transmembrane helix dimers; evolutionary algorithms
giotto
Michael K. M. WONG            

B.Sc. Computer Science, University of Macau

Research topic: Prediction of protein side-chain prediction conformations
Bachelor Student





Previous Members
jackyJacky H. K. Chan
M.Sc. Software Engineering, University of Macau
Email: jacky_c_[at]_umac_[dot]_mo (please remove all underscores)
Research topic: Molecular dynamic simulations of nanodroplets on hydrophobic surfaces upon the application of external electric fields
Wendy W. T. Lam
Email: lamwunteng_[at]_gmail_[dot]_com (please remove all underscores)
Project: The design of a mobile and tangile interface for molecular visualization software; machine learning-based scoring function for protein-ligand docking

Current: Working in Macau
Simon H. Cao         
M.Sc. Software Engineering, University of Macau
Email: hank9cao_[at]_gmail_[dot]_com
Research topic: Structure prediction of transmembrane alpha helix dimers

Current: Doing PhD at Germany
Marcus C. K. Ng
Email: marcus_[at]_fullgoods_[dot]_com
Project: Improving protein-ligand docking by Particle Swarm Optimization (PSO)
Awarded as the one of the best final year projects in the academic year 2013/2014 and entered into the Dean's Final Year Project List

Current: Doing master at UK
Ricardo Brito
Email: rikysantos19_[at]_hotmail_[dot]_com(please remove all underscores)
Project: Parallelizing Bioinformatics applications with CUDA

Current: Master study in University of Macau